Validation of mzQC Files

Here we give a brief overview of syntactic and semantic validation requirements of mzQC files. Full validation is implemented in the mzqc-pylib reference implementation.

Syntactic Validation

With the help of the mzQC JSON schema, mzQC instances can be readily checked for syntactic schema compliance. There are a number of JSON schema implementations for use in various programming languages that also support validation of JSON schema draft-07 from which the mzQC schema is designed.

Semantic Validation

Due to the advanced design of the mzQC JSON schema, many aspects of a valid mzQC file can already be verified via syntactic validation without the need of explicit semantic validation. There are, however, a few additional semantic rules that need to be followed to create fully compliant mzQC files.

Additionally, more detailed checks might be performed to assess the validity of specific metric values on a case-by-case basis (e.g., percentages should sum to 100%).

Find out about more details on the validator page itself.

Online Validation

mzQC is web-native, and integrates nicely with modern applications and websites. You can find one example on this website if you visit the Validator.

We have several alternatives for validation, however. For these, have a look at the respective projects.